DiTing

DiTing copied to clipboard

Hi Diting team, I get **pathways_relative_abundance_gene_level.tab**, it doesn't produce **pathways_relative_abundance.tab** due to so many samples Can I use some script (pathway.py in the scripts) to produce the **pathways_relative_abundance.tab** Thank you,...

laibinhuang

Error for visualize the abundance table using my own combination of samples

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Dear Xue, thank you for your program here, I would like to discuss a recent issue I have met: I group my samples in **pathways_relative_abundance.tab,** but it produces the error...

laibinhuang

Heatmap with pie-chart in background

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Cool tool and thanks for bringing this out to the community. I was wondering why I'm getting a pie-chart in the background of carbon_cycle_heatmap.pdf but not in any of the...

Anto007

关于KEGG注释想使用KOBAS软件的问题

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您好： 请问如果想在KEGG注释这步不用kofamscan而换使用KOBAS我应该怎么做？

MaxBai0123

ZeroDivisionError: float division by zero 错误

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Hi, 我用diting跑转录组预测的时候，出现了以下错误  我的代码如下： source activate diting-env diting.py -r /mnt/data1/project/HYHseason230215/17_diting/fq -a /mnt/data1/project/HYHseason230215/16_reassemble/spaders/contig -o diting_result -n 60 -m 200 /mnt/data1/project/HYHseason230215/16_reassemble/spaders/contig 中是我用spader组装的转录组contig文件的目录，/mnt/data1/project/HYHseason230215/17_diting/fq是我转录组clean reads文件的目录 想请问一下您那边有什么推荐的解决方法吗 非常感谢！

heyinghui22

Hi Team, I am running diting on my shotgun samples dervied from soil. I am getting error like this 2023-09-26 10:21:21 [INFO ] ******[6/12] Resolve ko_list file into dict******* 2023-09-26...

mahesh1368569

Restart or resume diting

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Hello, I was recently using the Diting program to perform functional annotation, but my computer shut down unexpectedly during the process. At the time of the shutdown, the annotation was...

tpellegrinetti

Error at step 8

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Hi, I’ve been running DiTing with 174 marine metagenomes, which took ca. 4 months. Then after the KEGG annotation was done, the program failed (shown below). I am wondering whether...

ramalok

Key error NODE

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Hi Chun-Xu Xue, I am writing you because I am experiencing a problem with Diting. Please see the image attached. Please can you give me a hand with it? Thanks...

jccash

Atrtribute Error in check.py

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Dear Support Team, I am writing to report an error that I am encountering while using the program. Despite testing with the example folder sample files, the error persists. I...

tpellegrinetti