Error at step 8

[ramalok]

Hi, I’ve been running DiTing with 174 marine metagenomes, which took ca. 4 months. Then after the KEGG annotation was done, the program failed (shown below). I am wondering whether I could restart the program in step 8/12. Would that be possible? I didn't see a "--continue" option.

thanks!

2022-12-02 05:27:36 [INFO ] KEGG annotation for SO100802 2022-12-02 17:35:53 [INFO ] KEGG annotation for BL110208 2022-12-03 12:13:16 [INFO ] KEGG annotation for SO131212 2022-12-03 13:52:27 [INFO ] [8/12] Merge KEGG annotations* 2022-12-03 13:52:27 [INFO ] Merge KEGG annotations Traceback (most recent call last): File "/home/apps/diting/0.9/DiTing/diting.py", line 259, in main() File "/home/apps/diting/0.9/DiTing/diting.py", line 191, in main merge_ko(kegg_pieces_dir, ko_merged_tab) File "/home/apps/diting/0.9/DiTing/scripts/func.py", line 175, in merge_ko fo.write(basename + '\t' + gene_id + '\t' + k_number + '\n') OSError: [Errno 5] Input/output error

[SilentGene]

Hi,

Unfortunately, Diting doesn't support running from the stopped point now. We are considering supporting this in future releases.

Cheers, Heyu