Liang Chen

Yes, me too.

When I download the .zip file and install it locally, I also fail. > library("devtools") Loading required package: usethis > install_github("r3fang/SnapATAC") Error: Failed to install 'unknown package' from GitHub: Timeout...

I have the same request, can you provide a rough version of the visda.yaml file?

Can you provide your email to me? I can send them to you in a compressed folder.

Thank you for your interest in our work. We are using tensorflow version 1.14 and we have not tested the version above 2.0. In addition, regarding the 499 and 500...

Hello, sorry for the late reply. Since I need to take an exam recently, I may be able to help you with this proposal (Singularity container) a while later. I...

oh oh, thanks for your reply. I see the dynamic setting in experiment.py file. Then I have another question: label_mat[labels==-1, :] = -1 label_mat[:, labels==-1] = -1 label_mat[label_mat==0] = 0...

Yes, you are right, I misunderstand these two sentences: pos_mask[label_mat==1] = 1 neg_mask[label_mat==0] = 1. Originally I think it will add extra constraint on pos_mask and neg_mask, but if you...

Hi, I find that the choice of upper threshold u and lower threshold l in dynamic process has a significant impact on clustering results. The 0.95 and 0.455 are selected...

I have also encountered this problem before, which is really strange.