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                                            xue-222

no reference transcripts were found for the genomic sequences where reads were mapped!

> 我通过简单地删除gtf文件中显示染色体编号的每个“chr”来解决此问题：mm10.ncbiRefSeq.gtf（另存为mm10.ncbiRefSeq_MODIFIED.gtf）。即，将“chr1 to chr22”替换为“1 to 22” stringtie -p 8 -G GTF_FILES/mm10.ncbiRefSeq_MODIFIED.gtf -o STRINGTIE/Trim_MT1_chr19.gtf -l MT1 SAMTOOLS/Trim_MT1_chr19.bam why did you do it?

no reference transcripts were found for the genomic sequences where reads were mapped!

I tried and still couldn't solve the problem

invalid feature coordinates from long read 'collapsed' assembly

Did you solve the problem?

invalid feature coordinates from long read 'collapsed' assembly

Error: invalid feature coordinates (end