Xavier Robin
Xavier Robin
## Environment Information Open Babel version: 3.1.1 - installed with apt Operating system and version: Ubuntu 22.04, Python 3.10.4 ## Expected Behavior I want to redirect the output stream in...
Follow-up of #67. `ci.coords` should be able to accept every coordinate that `coords` takes. An application would be to add error bars on PR curves ``` r
CI is broken for multiclass.roc: ``` data(aSAH) multiclass.roc(aSAH$gos6, aSAH$s100b, ci=TRUE) Error in roc.default(response, predictor, levels = X, percent = percent, : formal argument "ci" matched by multiple actual arguments ```...
This already kind of works with ggroc and univariate multiclass: > m ggroc(m$rocs) This should be improved so that legend is shown correctly, and extended to multivariate plots with ggroc,...
The all-in-one calls are difficult to maintain and to test. For instance all the *.formula methods are a mess. Functions such as ci or auc should not create ROC curves,...
``` > text.levels head(text.levels) [1] 1 1 1 1 3 2 Levels: 1 < 2 < 3 < 4 < 5 > levels(text.levels) [1] "1" "2" "3" "4" "5" >...
The plyr is old and newer, better options exist for parallel execution. The foreach package seems to be the way to go, with different backends available, and the doRNG package...
Implement vertical, horizontal and threshold averaging, as described by [Fawcett](https://www.math.ucdavis.edu/~saito/data/roc/fawcett-roc.pdf) Input: list of roc curves. Output: object with behavior like ROC. Can calculate AUC and plot, but not CI. See...
This should start with simple operations like var and later ci.coords. The following sub-steps will have to be taken: - [ ] Define a class of tests that can be...
It should be possible to calculate the significance of a single ROC curve. This would test H_0: AUC = 0.5. For a full AUC this should correspond to the Wilcoxon...