Xinmiao Yan

error when run computeCommunProb

1

hi, nice tool, but I encountered a problem when running computeCommunProb, the issue is listed below: ``` cellchat

IntegrateData error: number of items to replace is not a multiple of replacement length

6

I used below code to integrate data by rPCA, but error occurred, I've tried many ways but still couldn't solve this problem. appreciate it if you could help. ``` #####...

weird results

1

hello, I ran cnvkit with paired tumor-normal bam files, and get weird result. among the 40 paired samples, every one is looks like this, the left bar is always blue....

hello, nice tool, I want to try it to identify cnv event for single cell data, and I have single cell expression matrix, but I don't know how to prepare...

it takes a very long time to calculate the DEGS by using DEG() on less than 4000 cells, is there any other method can acerbate this step?

issues when installing ITALK

1

hi, I used the code to install iTALK nd tried many time but failed, would you help? thanks so much the code: `devtools::install_github("Coolgenome/iTALK", build_vignettes = TRUE, force = TRUE)` the...

!Significant differences in avg_log2FC between Seurat versions 4 and 5 in FindMarkers function

2

I ran the FindMarkers function on the same data with the same group assigned. However, the avg_log2FC is strikingly different between the old Seurat version 4 and the new version...