Xavier Grau-Bové

I think I'm encountering one (or maybe two?) issues realted to the one mentioned by the OP. Specifically, when running `sm.run()`, I get this: ``` Calculating gene-gene correlations in the...

For what's worth, I'm finding the same error with more recent numba and python versions (from conda, version 23.1.0): ``` python 3.9.12 h12debd9_0 sam-algorithm 1.0.2 pypi_0 pypi samap 1.0.14 pypi_0...

I've encountered the same error with these library versions, installed in an older conda environment (4.12.0): ```bash python 3.7.12 hb7a2778_100_cpython conda-forge sam-algorithm 1.0.2 pypi_0 pypi samap 1.0.3 pypi_0 pypi scanpy...

I think I've found a workaround: removing (or commenting out) the `@njit(parallel=True)` line in the `_refine_corr_kernel` of the [`mapping.py`](https://github.com/atarashansky/SAMap/blob/main/samap/mapping.py#L1445) script avoids the use of no-python code (via `numba`), which circumvents...