Juraj Ahel

misleading message with relion_image_handler --average_all_movie_frames

1

This is a minor issue with messages that relion displays. when using `relion_image_handler --average_all_movie_frames --i input.star --o output.mrc` then natural i/o is .star => .mrc But relion will still display...

Does not respect NUMA constraints

5

Running `numactl --cpubind=0 --membind=0 -- vmtouch -ldw targetfile` shows locked memory over all available NUMA nodes. Expected behavior would be for all the memory to be membound to NUMA node0....

Required scope for the YouTrack BearerTokenConnection bearer token is unclear. ## Expected behavior Report which of the two auth scopes are missing ## Actual behavior Generic error response when there...

Faulty date sorting

1

**Describe the bug** Sorting by build date within one collection of containers sorts the dates alphabetically rather than chronologically **To Reproduce** Open any container collection and try to sort column...

DT 37.0 consistently crashes when "read dwarves" is issued - DF 43.05 64 bit, Windows 7

6

got latest DT with latest DF 64 bit - both run fine, DT connects successfully but doesn't display dwarves. When clicking the button [run.log.txt](https://github.com/splintermind/Dwarf-Therapist/files/692543/run.log.txt)

mmseqs local runs considerably slower than mmseqs colabfold api regardless of optimizations

22

Some issues / unexpected behavior when running mmseqs search and other features used in colabfold. But the low speed happens in the mmseqs step, so I think this is the...

Details TBA

Currently, if an amica file is used as input, it's not possible to recalculate differential expression. Would be convenient to have this functionality, e.g. if the user who is in...