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                                            Hope Woods

Fix: Conditionally pass idx_pdb to writepdb to avoid AttributeError with SelfConditioning/ScaffoldedSampler

This PR resolves an AttributeError that occurs when running the example script design_macrocyclic_binder.sh using the SelfConditioning or ScaffoldedSampler samplers. After PR #348, the code attempted to pass sampler.idx_pdb to the...