Wojciech Lason

Thanks for the awesome package! When installing from `scarches_linux.yaml`, conda warns me of the following: `WARNING conda.models.version:get_matcher(556): Using .* with relational operator is superfluous and deprecated and will be removed...

BBKNN for ATAC data

1

Hi! Thank you for the awesome package :) I was wondering if it is possible to use other dimensionality reduction methods than PCA for `bbknn.bbknn`, such as LSI which is...

Memory requirement for ~100k cells RNA+ATAC

1

Hi! I am trying to use your package to integrate a dataset of RNA + ATAC, it is approximately 100k cells. I keep having issues with jobs getting OOM killed....