William McCorkindale

Thanks for the suggestions! I agree that being able to save plots would make a huge difference - hopefully it's possible to build upon the gist you linked and include...

Hi Judith! Let me try to help :) Could you attach some example code and give more details about what you are trying to plot? From my understanding, you have...

The easiest way to add the 'names' of the molecules would be to to add the pose index as a column in the `table` dataframe: ```python import plotly.express as px...

> same here, > i simply changed > > import tensorflow as tf > > import tensorflow.compat.v1 as tf I tried this but it did not fix it (same issue...

Haven't been able to fix it yet - looks like it's something to do with the save/loading of the model but I'm not experienced enough with TF to know where...

@baojianzhou I tried adding that to both `t2t-decoder` and `t2t-trainer` which gives me a new error: ``` tensorflow.python.framework.errors_impl.NotFoundError: Restoring from checkpoint failed. This is most likely due to a Variable...

@baojianzhou Yes it's working now! Thanks so much :)

@assij my `t2t-trainer` looks like this: ``` from __future__ import absolute_import from __future__ import division from __future__ import print_function from tensor2tensor.bin import t2t_trainer import tensorflow.compat.v1 as tf def main(argv): t2t_trainer.main(argv)...

@assij No I wasn't - I got it working for a transformer on a custom `PROBLEM`, not sure that changing hparams should affect this problem in particular.

So so sorry for not replying, I had totally missed your follow-up questions! In any case, here are some answers: > increase the size of the dots This can be...