teneto
teneto copied to clipboard
Temporal Network Tools
Some networkmeasures will not run if TemporalNetwork is in the HDF5 format. These should be fixed. Measures are: temporal_degree_centrality, volatility, fluctuability, sid, topological overlap, and participation coefficient with negative edges)...
## General 1. create teneto.stats module ## NHSTing if network is not more "x" than random 1. allow for multiple ways to permute network (taken from Holme 2012). 2. allow...
Outlined in https://arxiv.org/pdf/1501.00040.pdf
Been reported in emails that TemporalNetwork can be slow. It was a little unclear in correspondence if this was a dense or sparse matrix. But the problem is *probably* when...
The function teneto.networkmeasures.volatility() throws > AttributeError: module 'scipy.spatial.distance' has no attribute 'kulsinski' Minimal working example: ``` import teneto import numpy as np np.random.seed(2019) tnet = teneto.TemporalNetwork() tnet.generatenetwork('rand_binomial',size=(5,3), prob=0.5) volatility =...
teneto/utils/utils.py still uses the deprecated function scipy.temporal.distance.matching (in line 519), which was removed in scipy version 1.9.0 (see [https://docs.scipy.org/doc/scipy/release.1.9.0.html](https://docs.scipy.org/doc/scipy/release.1.9.0.html)).