Liang Ou

Results 24 comments of Liang Ou

Update: I get a curve that looks like this,after the threshold(`min_coverage`) is strictly controlled(**90%**) ![PRC](https://user-images.githubusercontent.com/37523816/65403864-7c6af600-de08-11e9-815c-18a2f87b3791.jpg) Obviously, my model still has a lot of room for improvement.@marcus1487 @myrtlecat ,Could you give...

Sure,here is the reference file for mapping. [covid19 reference](https://www.ncbi.nlm.nih.gov/nuccore/NC_045512.2?report=fasta) Thanks!

Hi,here is my multi-process approach ![image](https://user-images.githubusercontent.com/37523816/89524737-ad34fd80-d817-11ea-812c-c18fbbd8830d.png) When this code executes, only one process is always in the "R" state,with 100% CPU,and other processes is in "S" with 0% CPU Thank...

The error does not seem to consistently repeated. Sometimes it's an error with a timeout aroused by` curl` here are my code ``` library(osfr) anes_project

I ran the command several more times.Each time it's blocked at random,Maybe it's stuck at 30GB or 40GB.For a large folder(500GB), this error can be fatal.

Complete error record ``` Traceback (most recent call last): File "/home/weir/anaconda3/lib/python3.7/site-packages/urllib3/connectionpool.py", line 672, in urlopen chunked=chunked, File "/home/weir/anaconda3/lib/python3.7/site-packages/urllib3/connectionpool.py", line 421, in _make_request six.raise_from(e, None) File "", line 3, in raise_from...

Hi, I ran scnym exactly following the installation tutorial on github and got the following error `RuntimeError: CUDA error: CUBLAS_STATUS_EXECUTION_FAILED when calling cublasSgemm( handle, opa, opb, m, n, k, &alpha,...

Hello @jacobkimmel, I've managed to resolve the issue by transitioning to a V100 compute cluster. It appears that the A100 is incompatible with older versions of CUDA. If feasible, could...

Hello, Thank you for reaching out and detailing the issue you're experiencing with DENA when using LSTM_extract.py, specifically the part where it integrates with Tombo and results in a FloatingPointError:...

Hi @jorainer I ran into the same problem . because 'Schizosaccharomyces pombe' does not exist on `AnnotationHub`. I had to download the GFF file for this species from ensembl. The...