weihongqi

I ran into the same error and notice the augustus config folder downloaded from the repo (https://github.com/lfaino/LoReAn/tree/master/third_party/software) did not have "crispa" as listed as a species ...

I ran into the same error and fixed it by following the suggestion from here: https://stackoverflow.com/questions/35007134/c-boost-undefined-reference-to-boostfilesystemdetailcopy-file?answertab=votes#tab-top In details, in src/PhysicalFileFactory.cc replace #include with #define BOOST_NO_CXX11_SCOPED_ENUMS #include #undef BOOST_NO_CXX11_SCOPED_ENUMS