Thomas Weber
Thomas Weber
This PR adds a new module for mosaicatcher counts method. Mosaicatcher counts Strand-seq reads and classifies strand states of each chromosome in each cell using a Hidden Markov Model. The...
**Snakemake version** 8.2.0 **Describe the bug** I need to specify a node CPU architecture for some of my rules and I cannot use the constraint parameter using slurm. **Logs** Profile:...
Hi, Thanks a lot for your work, I was looking into something similar recently! I tried to setup stremio using your guidelines but I'm facing a playback error when starting...
### Contact Details [email protected] ### What happened? Ploidy issue ### Steps To Reproduce See below ### Mosaicatcher-pipeline Version 1.5.1 (Default) ### Command used ```shell -s workflow/Snakefile --config genecore=True genecore_prefix=/g/korbel/STOCKS/Data/Assay/sequencing/2024 genecore_date_folder=2024-07-24-HC7FTAFX7...
## PR checklist Closes #XXX - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should...
### Have you already looked into this topic? - [x] I've reviewed the [Vizro documentation](https://vizro.readthedocs.io/en/stable) for any relevant information - [x] I've searched through [existing issues](https://github.com/mckinsey/vizro/issues) for similar questions -...