nanofilt

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no log file output

18

run nanofilt and add --logfile file options, but no log file output

hugs314

Incomplete deflate data

1

Hi, When I finished " gunzip -c All_ONT.fastq.gz | NanoFilt -l 3000 | gzip > Clean.NanoFilt.fastq.gz", I want to see how many reads it has. So I ran ""pigz -dc...

xujiaweiouc

Is it possible to process fasta file

7

Hi, I am writing here to request if you could help me to use nanofilt for my purpose. I am working on a plant genome assembly, and wanted to run...

amit4mchiba

Suggestion

3

Hey! Thanks for the great program. There were two things that would, in my eyes, really round out the utility of this tool. 1) Removal of PolyA/T tails. Only a...

Potatoconomy

suggestion : add a brief output report

2

Hello I just start to deal with minion reads, and I use nanofilt to exclude reads previously to downstream analysis. I just have a suggestion, it would be nice to...

mariabernard

ID missing from summary file

1

When using Nanofilt with --summary flag, I have an issue with a few run IDs not existing inside the summary file. Would it be possible to either: - Skip/discard them...

Electrocyte

No logfile

1

Hi, thank you for your work on this tool. I just wanted to mention that there is no logfile output despite the use of the --logfile parameter My command is:...

pkerbs