wanxn518

How to understand RELATIVE EVOLUTIONARY DIVERSION (RED)?

3

Dear GTDBtk team, After reading your article and github question about the RED value, I still have some questions. In the results from the run using `gtdbtk classify_wf`, REDs were...

The annotation results of gtdbtk are inconsistent with the Phylogenetic position.

4

Hello, GTDB team I use GTDBtk version 2.3.2 to classify my MAGs, so I know that these MAGs belong to a certain phylum and a certain class. However, in the...

Errors encountered during operation.

2

Hi phylodm team After I successfully installed it, there was such an error during operation. I don't know how to solve it. I am a novice in python, and I...

Hi donovan-h-parks, I installed the software and the test data provided ran successfully, but when I ran my own data for testing, I encountered some: Running phylorank decorate was successful:...

Problems changing names for internal nodes

3

Hi Dr. Zhou There is an example of renaming a leaf node in https://tongzhou2017.github.io/itol.toolkit/articles/LABELS.html, but can I use the "LABELS" module in itol.toolkit to rename the internal nodes of a...

Problems encountered during operation

3

Hi Dr. Zhou  Thank you very much for the great tool you have developed, I am running with this error and I don't know what to do, can you...