wajm

Data loading with BD Rhapsody

7

Hi, I'm using BD Rhapsody VDJ scRNA-seq platform, but their output is quite different from others. So I transform the BD output into immunarch example file. But, BD has no...

h5Seurat format

8

Hi, is it possible to use h5Seurat format converted by SeuratDisk in STREAM? https://mojaveazure.github.io/seurat-disk/articles/convert-anndata.html My data is integrated seurat object.

STREAM2

1

When we meet with STREAM2? I can find STREAM2-web in this pinellolab git.

Seurat object

26

Hi, I have precomputed seurat objects. Can I use these objects? or any example?

multicore option

1

I want to run about 50~ 200k cells trajectory. is there multicore or multithreading option?