Mark Gorelik

Hi @ArtRand, Thank you for the quick and thoughtful reply. My bad if I failed to RTFM, but how do you separate reads by barcode using this approach?

Hi @ArtRand, Again, thank you for the fast response! Based on my understanding of the dorado docs I don't think that workflow would work particularly well for bacterial assemblies. For...

Hi @ArtRand, Thank you for bringing up the BC tag for samtools - I wasn't aware of that! I'll go ahead and try that out

Hi @ArtRand, Thank you for your patience and suggestions - rebasecalling took minute Unfortunately running the code blow didn't work: ``` dorado basecaller [email protected] pod5_dir \ --kit-name ${kit} \ --reference...