Vince

Results 57 issues of Vince

Hello, Is there any effort underway (or interest in) to allow users to write additional file-level metadata, e.g. for provenance of how data contained were generated? Something like for the...

Should we categorize tutorials by difficulty? It could help adoption to balance empowerment (more advanced tutorials) with ease of use / comprehension (simpler, shorter, more essential tutorials). To not overwhelm...

type: documentation

**Is your feature request related to a problem? Please describe.** For tinkering around with some of the types defined here, it could be useful to have a basic `Show` instance....

good first issue
type: feature request
help wanted

Would it be possible to have certain always-invalid or always-valid predicate compositions cause compilation errors? For example: ``` @ type InvalidSize = Size[Equal[W.`-9`.T]] defined type InvalidSize ``` or ``` @...

@johanneskoester @nsheff Note that `units_peppy.tsv` is included not for necessity, but to show how a `peppy` user may encode a subsample/units table, and have it still function with the workflow.

It seems I'm unable to write a value class when in class-based mode, but without `--class-based` it works. This looks true both for my version with Scala 2.13... ``` $...

If we're going to define build packages in a Python file rather than JSON, defining a data type would be safer and more powerful than we currently have. There's a...

enhancement
brainstorming
likely-solved

Does `nucleoatac occ` require a FASTA as `run` does? It looks like this may be implicit through `run_occ` making an `OccupancyParameters`, for which the constructor calls into `read_chrom_sizes_from_fasta`. It looks...