DiaNN
DiaNN copied to clipboard
vdemichev
DIA-NN - a universal automated software suite for DIA proteomics data analysis.
Hey Vadim, Great catching up with you at International HUPO. I tried QuantUMS Beta 27 on some of my recent data and ran into a few bugs that I wanted...
Hello, thank you for your contribution. Does diann's output contain all the ionic Density?
I am testing out the 1F slice-PASEF method from your preprint and have the following questions... 1. I am wondering what the best practices are to run this in the...
My computer (AMD Threadripper, 24 cores, 48 threads, 256 Gb RAM) freezes after starting DIA-NN 1.9 spectral library prediction. It does not respond to anything and requires a force shutdown...
Hi Vadim, Hope this message finds you well. I am currently searching in DIA-NN using two proteomes- mouse and human, making the search space rather large. Do you have any...
Hi Thanks for your work in DiaNN. I'm currently using the latest version of DIANN to process phosphoproteomics data, and I have obtained wonderful results. Which include tables of phosphorylation...
Hi there, I'm trying to run 4x phospho enriched and 4x global samples in DIA-NN (1.8.2 beta 39) but i am not sure if DIA-NN is bugged or if its...
We need to use DIA-NN to process our lactylation proteomics data, however we didn't find anywhere to input these parameter(lactylation modification or 72.021 Da Delta mass). So our project have...
Hi Thanks for your work in DiaNN. I used Diann1.8.1 in linux system and have a few questions about '--qvalue' and '--matrix-qvalue' . With the same DIA data, spectral library...
Hi, Thank you for developing DIA-NN! I have used DIA-NN (version 1.8.2) within the FragPipe platform (version 21.1). I have started exploring the main output and noticed that certain columns...
