Ümran Yaman

icon company Institute of Neurology at University College London icon location London icon location Research Fellow (Bioinformatics)

Results 2 issues of Ümran Yaman

Error in file(con, "r") : cannot open the connection

3 comment

Hi @Al-Murphy, I am re-running the scFlow.Rmd, however report_qc_sce function throws the error below, cannot read overview.Rmd from system.files. ```{r eval=TRUE} #Store results in same temp dir report_qc_sce(sce, report_file =...

Haplotagged CRAM and bedmethyl

4 comment

Hello, I do have a haplotagged CRAM file, and phased outputs from the epi2melabs/wf-human-variation workflow, we have used --mod with --phase parameter. I have bedmethyl files for haplotypes 1, 2...

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