UGENE

Download UGENE: https://ugeneunipro.github.io/ugene/

Building UGENE

Prerequisites

Qt (>= 5.12.0 and <= 5.15.x) with the following components installed with Qt installer:

• Desktop
• QtScript

For Windows users:

To build with devenv (Visual Studio):

1. qmake -r -tp vc ugene.pro
2. open ugene.sln from Visual Studio and build or run devenv.exe ugene.sln /Build from MSVC command line

To build with nmake:

1. qmake -r ugene.pro
2. run nmake, nmake debug or nmake release to build UGENE

For *nix users:

To build and install UGENE on *nix:

1. qmake -r PREFIX=/opt/ugene-${VERSION}.
2. make -j 4
3. sudo make install
4. sudo ln -s /opt/ugene-${VERSION}/ugene /usr/bin
5. ugene -ui

Note: you do not need 'sudo' if you select your own folder for the installation.

Build with CUDA

1. Download and install required software from http://www.nvidia.com/object/cuda_get.html for your OS

2. Make sure that some system variable are set:

   CUDA_LIB_PATH=/path_where_cuda_installed/lib
   CUDA_INC_PATH=/path_where_cuda_installed/include
   PATH=$PATH:/path_where_cuda_installed/bin
   

   for *nix: LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$CUDA_LIB_PATH

3. cd ./src and open ugene_globals.pri, find and set variable UGENE_CUDA_DETECTED = 1

Build with OpenCL

1. Download and install video driver with OpenCL support.
2. Download OpenCL headers from http://www.khronos.org/registry/cl/ or find them in video vendor SDK directory.
3. Build & run UGENE as usual. During startup UGENE will try to dynamically load 'OpenCL' library (See OpenCLHelper.cpp).