XIE LAB @ UCI

Deep learning for gene expression inference

uci-cbcl

A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences

uci-cbcl

Understanding sequence conservation with deep learning

uci-cbcl

MICCAI18 DeepEM: Deep 3D ConvNets with EM for Weakly Supervised Pulmonary Nodule Detection

uci-cbcl

WACV18 paper "DeepLung: Deep 3D Dual Path Nets for Automated Pulmonary Nodule Detection and Classification"

uci-cbcl

An online EM implementation of the MEME model for fast motif discovery in large ChIP-Seq and DNase-Seq Footprinting data

uci-cbcl

A deep learning package for predicting TF binding

uci-cbcl

Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction

uci-cbcl

[MICCAI' 19] NoduleNet: Decoupled False Positive Reduction for Pulmonary Nodule Detection and Segmentation

uci-cbcl

Deconvolving tumor purity and ploidy by integrating copy number alterations and loss of heterozygosity

uci-cbcl