Tyler Gross issues

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                                            Tyler Gross

Homo_sapiens/NCBI/GRCh38/Annotation/Genes/genes.gtf 'gene_id' field refers to gene symbol, not Ensembl id

I tried running nf-core/tfactivity -r dev with --genomes GRCh38 and it is successfully staging the genes.gtf and genome.fa file, however I am getting an error that gene_id is not a...

gatk PreprocessIntervals failing

Has anyone encountered this error before? ``` Error executing process > 'preprocessIntervalList (preprocessIntervalList)' Caused by: Process `preprocessIntervalList (preprocessIntervalList)` terminated with an error exit status (2) Command executed: gatk PreprocessIntervals \...

Nextflow pipeline to generate data for nf-core/test-datasets gwas branch

Updated repo with a nextflow pipeline to download the data and updated the README