Nathalie Vialaneix

ggplot2 version in commit 493461fb22dedeb5e6f4d8850f2b4907f6aa6898 solves this problem

work in progress from commit 9383f3ffa0f9175a0a56c1855a5efae6ab8359b1 - [x] check the addition of ggplot2 elements like palette, name of the legend, ... (choose defaults that are the best) - [x] check...

Addressing **check the addition of ggplot2 elements like palette, name of the legend, ... (choose defaults that are the best)**: - [X] palette : default viridis palette; custom palette can...

Addressing **check if prior.count should be added** Added a prior count in fea479fb32bf022125c4d102a34cb4bb166e0ffe (similar to edgeR::cpm).

Addressing **extend to sparse matrices in a smart way** (the "smart way" might not be quite perfect though): - [x] `dgCMatrix-class` - [x] `dsCMatrix-class` - [x] `dist` - [x] `HTCexp`...

add xaxis fixed in commit 8b0a78c9c6cea34a066b334747618c68c314209e

add clustering in commit 4fb14544dd32604f0177eb8960036ca0d4c8e587

add dendrogram: a first version is provided in commit 906e1d4fbdbd02bfc5629a596524639258fd2be9 Next to do: - [x] check on iris data - [x] factorize code (create a function for coordinates transformation in...

finished dendrogram in commit 06a406a3029f975bebb9d21dea86992342bafbf8

added documentation in commit 570bc9d3f83d6d48ccc39153a65815681df83892