Tom

Hi, i'm having a very similar problem caused by the need to manually interrupt the program. For the time being, i use a crude alteration in deepbinners realtime.py script. I...

jrherr i dont know if this is a suitable solution for you, but: If you have acquired deepbinner using git, you can merge the hotfix into your local repository using:...

For anyone finding this thread: You can make a small change in deepbinner.py by yourself, explained here: https://github.com/eclarke/Deepbinner/commit/00e9ff93a0ffa21f583e258cd071fec00ae4f0a8 .

> Hi Sebastian, > the `bioconda` executable is built with `SSE4.1` (by adding `-DCMAKE_CXX_FLAGS="-mno-avx2"`) and without CUDA support. Should we add something for AVX512 as well? Spoa has a CMake...

> Are you referring to Bioconda executable or compilation from source? Compilation from source (same as jueneman)

Same thing happening here. ``` checkm coverage \ --threads 24 \ --extension .fasta \ /bins_output \ /checkm_coverage.tsv \ /49_1_L001.bam \ /49_1_L002.bam \ /49_2_L001.bam \ /49_2_L002.bam \ /49_3_L001.bam \ /49_3_L002.bam ```...