berokka

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Hello, Thank you for this tool. I tried to run it with a bacterial genome and it returned the same input sequence despite having clear overlaps at the beginning and...

mgarl-10

Just reporting the conda installer for berokka has a Perl issue. ``` conda create -n berokka_env berokka conda activate berokka_env berokka Can't locate Bio/SeqIO.pm in @INC (you may need to...

Koen-vdl

Orient and rotate mitochondrial genome

2

I have an animal mitochondrial genome assembled by Unicycler (so no overlap). I'd like to orient and rotate the genome to agree with its closest relative in Genbank. I have...

sjackman

``` >tig00008674 len=10963 reads=1 covStat=0.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no ```

tseemann

Currently uses 1 .. N which is cleanand will always work, but names might be better.

tseemann

Get file from circlator?

tseemann