Taylor Salo

Results 969 comments of Taylor Salo

>@tsalo didn't you try to implement something similar back in the days? I did have something to work with this kind of trigger, but in my case it was exacerbated...

I think that's a great idea

Using the weighted-average CBF and ATT as priors doesn't seem to help in our test dataset. ![image](https://github.com/user-attachments/assets/b28be785-9499-4db5-9fc8-dda88bb3416b)

@mattcieslak was talking about this idea in scrum today. We can add a step to `asl_fit_wf` to do a quick CBF calculation after HMC, but before SDC + coregistration. Or...

I'm currently trying to calculate CBF after SDC. I'll need to make a bunch of changes, since we don't write out a post-HMC+SDC version of the M0 scan and asl_fit_wf...

I think the problem is session-wise anatomical processing. This isn't supported in ASLPrep yet. I'm waiting for the fMRIPrep PR to be merged, then I'll copy over those changes to...

Sorry for the delay @araikes. I believe that the newly-pushed unstable version should support session-wise anatomical derivatives. If you could give that a try before I make a new release,...

I need to port over the relevant changes from pennlinc/xcp_d#1467: ``` Traceback (most recent call last): File "/opt/conda/envs/aslprep/lib/python3.12/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/conda/envs/aslprep/lib/python3.12/site-packages/nipype/pipeline/engine/nodes.py", line 525,...

@mariagiuliat I noticed that your BOLD files do not follow BIDS format. You have `run` in the filenames instead of `run-`. Can you try fixing that? As for the N4BiasFieldCorrection...