Taylor Salo

I'm in the process of fMRIPrepping Le Petit Prince for #785, and I've already done "Multi-echo masking test dataset" for #783. Both Le Petit Prince and the DuPre dataset require...

I had to edit both of those datasets locally. Perhaps @emdupre can push the necessary changes to her dataset, but none of us has write permissions for Le Petit Prince....

It might also be a good idea to exclude voxels with invalid T2*/S0 values from further analysis, rather than replacing them with values in reasonable ranges. At least for the...

> One thing to consider is, if there are >3 echos and there is a sub-threshold R^2, we should probably iteratively remove the latest echo until R^2 is above threshold...

>If this gets implemented, then we should keep track of the classification between iterations. That way, if the desired number of BOLD components are not found within the iteration limit,...

Just for posterity, here is some info from the four-echo integration test where this shows up. ### The warning ``` tedana/tests/test_integration.py::test_integration_four_echo /tmp/src/tedana/tedana/utils.py:201: RuntimeWarning: invalid value encountered in true_divide dsi =...

@Shotgunosine the README for this OpenNeuro dataset said that it would be released in 2020. Is what's on OpenNeuro the full dataset, or will more be published at a later...

Sounds good. Thanks @Shotgunosine!

@Shotgunosine I'm thinking of posting the fMRIPrepped data from this dataset to OpenNeuro in a new dataset, so that we can try fetching directly from there instead of OSF. Franklin...

It turns out OpenNeuro doesn't currently support derivatives-only datasets. Chris recommended using GIN G-Node, but that would require a new dependency, so now I'm going to look into using Google...