Trevor Bedford

Results 25 issues of Trevor Bedford

`vdb/dengue_sequences` has authors in format of `Corwin et al.`, `Dewi et al.`, etc... Zika, Ebola, etc... have authors in format of `Mlakar et al`. The presence of the `.` is...

I didn't like how in the the live version we have a mixture of "clades" like `MPXV Clade 1` and "lineages" like `B.1` and we call all of this "Clade"....

"Core" builds on nextstrain.org (those that appear as primary tiles) are builds maintained by the Nextstrain dev team. Each of these core builds should have a matching GitHub repo under...

Currently, epitope (`ep`) and non-epitope (`ne`) coloring for H1N1pdm NA is broken: * https://nextstrain.org/flu/seasonal/h1n1pdm/na/2y?c=ep * https://nextstrain.org/flu/seasonal/h1n1pdm/na/2y?c=ne

## Description of proposed changes This PR copies the logic in `nextstrain_profiles/nextstrain-gisaid-21L/` to `/nextstrain_profiles/nextstrain-open-21L/`. Specific gisaid vs open changes etc... were derived by diffing the existing `nextstrain-gisaid` vs the existing...