Travis Collier

Mixed case FASTA and upper case REF still causes mismatch/skipping. This was mentioned in issue #46 at the end (after closing), and @lbeltrame provided a simple diff to fix it....

Cleaner python3 example for use with gzip

4

Not much of an 'issue', but... The usage example with gzip could be better. ``` import ish_parser import gzip ish_filename = 'path/to/a/ish/file.gz' # Read content parser = ish_parser.ish_parser() with gzip.open(ish_filename,...

Made 'stand-beside' to vcflib

2

I've separated your code from vcflib to make a 'stand-beside' version. https://github.com/travc/GPAT It works with the current ekg/vcflib, the directory to which is just specified at the top of the...

test / example data no longer available (dead link)

3

The test / example data linked in the readme.md isn't available anymore.