traja

traja copied to clipboard

Support maDLC data

1

Is it possible to include an option to load multi animal DLC result files? Best, Patrick

Paddy159

Bump numpy from 1.18.5 to 1.22.0 in /requirements

2

Bumps [numpy](https://github.com/numpy/numpy) from 1.18.5 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...

dependabot[bot]

Bump numpy from 1.18.5 to 1.22.0

1

Bumps [numpy](https://github.com/numpy/numpy) from 1.18.5 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...

dependabot[bot]

Stock price forecasting demo

6

Demonstrate Traja with a stock market price forecasting example. Good place to start is the Colab notebook: https://colab.research.google.com/github/justinshenk/traja/blob/master/demo.ipynb

JustinShenk

Draft: Update pituitary gland ODE with better simulator, ODE class and dataframe

4

This is an update to get better ODE parameters, add an ODE class (based on its behaviour) and integrate it more closely with Traja. The new setup generates dataframes to...

WolfByttner

When I run the Jupyter Notebook I get the following warning (see below). Is this an error, should I do something about it? Thanks! `/home/user00/anaconda3/envs/softmatter/lib/python3.7/site-packages/traja/plotting.py:1411: UserWarning: FixedFormatter should only be...

rodrigo-j-goncalves

Update vaegan.py

15

Test run of the model is available at [Notebook](https://colab.research.google.com/drive/174FZGis1iGNOMW7pmv_8Br-3CO-22aKq#scrollTo=tQKdkCE2ExpN). Todo: Update vaegan trainer to current traja trainer

Saran-nns

`num_future` is included as an argument but not actually used. https://github.com/traja-team/traja/blob/659c8e0978042d561f8e13a4b0786d28c2ed7a41/traja/models/predictive_models/lstm.py#L31 @Saran-nns can you please remove or implement this?

JustinShenk

reset_state is included throughout code base but not used. https://github.com/traja-team/traja/blob/659c8e0978042d561f8e13a4b0786d28c2ed7a41/traja/models/predictive_models/lstm.py#L38 Can this be removed @Saran-nns ?

JustinShenk

Attention mechanisms seem to improve the time series prediction/forecasting and classification performance [sample paper](https://www.mdpi.com/1424-8220/20/24/7211) Deep learning models in traja can easily accommodate the attention layer 1. Create a self-attention mechanism...

Saran-nns