openbabel topic

List openbabel repositories

plip

412
Stars
98
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Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294

oddt

398
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115
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Open Drug Discovery Toolkit

Jupyter_Dock

246
Stars
65
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Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.

clusttraj

18
Stars
3
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Python script that receives a molecular dynamics or Monte Carlo trajectory and performs agglomerative clustering to classify similar structures.

POAP

23
Stars
7
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Parallelized Open Babel & Autodock suite Pipeline