histopathology topic
wsi-tile-cleanup
Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning
Histomorphological-Phenotype-Learning
Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Quesne J.*, Tsirigos A.*, and Yuan K.* Mapping the landscape of h...
Mixed_supervision
MICCAI2022: Multiple Instance Learning with Mixed Supervision in Gleason Grading.
SSL_CR_Histo
Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medical Image Analysis (MedIA) Journal, Oct, 2021.
Histopathology-Datasets
Ressources of histopathology datasets
pathology-whole-slide-data
A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
UNITOPATHO
Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.2021.9506198
kat
The code for Kernel attention transformer (KAT)
ACMIL
Attention-Challenging Multiple Instance Learning for Whole Slide Image Classification (ECCV2024)
wsiprocess
Whole Slide Image (WSI) Processing Library for Histopathological / Cytopathological Machine Learning Tasks