functional-annotation topic
eggnog-mapper
Fast genome-wide functional annotation through orthology assignment
atlas
ATLAS - Three commands to start analyzing your metagenome data
go-ontology
Source ontology files for the Gene Ontology
STAAR
An R package for performing STAAR procedure in whole-genome sequencing studies
amigo
AmiGO is the public interface for the Gene Ontology.
go-annotation
This repository hosts the tracker for issues pertaining to GO annotations.
helpdesk
The Gene Ontology Helpdesk
noctua
Graph-based modeling environment for biology, including prototype editor and services
reCOGnizer
A tool for domain based annotation with databases from the Conserved Domains Database
COGclassifier
A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category