biophysics topic
PySawit
Oil Palm Growth and Yield Model
FreeDTS
a package to simulate biomembranes at mesoscale
pyLattice
A python library for advanced lattice light-sheet image analysis
openfe
The Open Free Energy toolkit
pensa
PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.
ODTbrain
Python library for diffraction tomography with the Born and Rytov approximations
Pras_Server
Pras Server is a library to repair PDB or mmCIF structures, add missing heavy atoms and hydrogen atoms and assign secondary structure by amide-amide interactions of the backbone
EP-PINNs
EP-PINNs implementation for 1D and 2D forward and inverse solvers for the Aliev-Panfilov cardiac electrophysiology model. Also includes Matlab finite-differences solver for data generation.