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acpype

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OFFICIAL: AnteChamber PYthon Parser interfacE

gmx_MMPBSA

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gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.

AlphaPPImd

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Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks