Tony Yang

Still looking forward to this so that distance-based selection can be used with the gui interface (http://nglviewer.org/ngl/) not just by using `getAtomSetWithinSelection` from JS side

> those indices are pointers into `contacts.features` @arose ah, thanks so much for this! It finally makes sense now - some interaction donor contains more than 1 atom.

@fredludlow Interesting! I always think about H-bond, not necessarily the correct way, in terms of distance from the electronegative element to the hydrogen, as the orientation/angle of the H-bond should...

Hi all! Thanks for the mention @sgibson91 @choldgraf We heavily borrowed a lot of material from Jupyter, carpentries, and other projects. The flowchart looks amazing, we might steal it for...

Note that `top.atom(0)` leaks memory as well

Hey @tetron This came up during a discussion with @mr-c in the CollaborationFest 2019. I couldn't think about a better/more concise style but would love to have the ExpressionTool integrated...

Thanks both! @hainm @hichiaty

@j0kaso That's nice to hear. Glad you mentioned the format thing - I see the documentation website said it supports prmtop topology file? But I couldn't get it to work...

@j0kaso The problem I'm facing is that even after loading the trajectory file (NetCDF format), still no structure is displayed. So after loading prmtop with .nc file, the `-1` frame...