Tobias Fuhrer

icon company University of Basel icon location Basel icon location Senior Lab Manager - Mass Spectrometry - Product Development

Results 4 comments of Tobias Fuhrer

connection Error in Biocparallel for chromatogram function

update: with a smaller subset of just 4 files it works after executing the command bpis

connection Error in Biocparallel for chromatogram function

Thanks for the quick reply, we have 10 physical cores / 20 logical cores, even with setting SnowParam(3) we trigger this error: Error: BiocParallel errors 1 remote errors, element index:...

connection Error in Biocparallel for chromatogram function

Memory is not even close to be used up.

connection Error in Biocparallel for chromatogram function

ok that definitively helped, something is wrong with the parallel handling of the jobs whatever, it is even faster with serial processing and doesn't crash at all