nd2

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The --pre Test workflow failed on 2024-04-25 00:22 UTC The most recent failing test was on macos-latest py with commit: f139810cf856229eb17a5a0a97c3a7b97ad7c9f9 Full run: https://github.com/tlambert03/nd2/actions/runs/8825054394 (This post will be updated if...

github-actions[bot]

https://github.com/tlambert03/nd2/pull/193 added a quick fix for files with subloops, such as those that might occur if you pause and modify an nd acquisition in a specific way (#190) but it...

tlambert03

Implement sub-frame read/chunking

12

in the reader, at around https://github.com/tlambert03/nd2/blob/56cde515fdf121c8489f219b4bd7af8d7c2c4df2/src/nd2/_sdk/latest.pyx#L280 we should implement subframe cropping.

tlambert03

in many cases, most of the data is empty too, so it can be a real memory waste

tlambert03

Memory usage

6

* nd2 version: 0.1.4 * Python version: 3.7.10 * Operating System: Windows10 ### Description I try to load selected parts of nd2 files but too much memory is allocated for...

fjorka

ci(pre-commit.ci): autoupdate

2

updates: - [github.com/crate-ci/typos: v1.20.9 → v1.21.0](https://github.com/crate-ci/typos/compare/v1.20.9...v1.21.0) - [github.com/astral-sh/ruff-pre-commit: v0.4.1 → v0.4.3](https://github.com/astral-sh/ruff-pre-commit/compare/v0.4.1...v0.4.3) - [github.com/pre-commit/mirrors-mypy: v1.9.0 → v1.10.0](https://github.com/pre-commit/mirrors-mypy/compare/v1.9.0...v1.10.0)

pre-commit-ci[bot]

The --pre Test workflow failed on 2024-08-18 00:35 UTC The most recent failing test was on windows-latest py with commit: 3ce993951b4181578dda25df8b24f9bb561778a7 Full run: https://github.com/tlambert03/nd2/actions/runs/10436321701 (This post will be updated if...

github-actions[bot]

ci(pre-commit.ci): autoupdate

2

updates: - [github.com/crate-ci/typos: v1.22.9 → v1.23.6](https://github.com/crate-ci/typos/compare/v1.22.9...v1.23.6) - [github.com/astral-sh/ruff-pre-commit: v0.5.0 → v0.5.6](https://github.com/astral-sh/ruff-pre-commit/compare/v0.5.0...v0.5.6) - [github.com/pre-commit/mirrors-mypy: v1.10.1 → v1.11.1](https://github.com/pre-commit/mirrors-mypy/compare/v1.10.1...v1.11.1)

pre-commit-ci[bot]

ci(dependabot): bump CodSpeedHQ/action from 2 to 3

1

Bumps [CodSpeedHQ/action](https://github.com/codspeedhq/action) from 2 to 3. Release notes Sourced from CodSpeedHQ/action's releases. v3.0.0 What's Changed chore(ci): run ci on every pull request by @​adriencaccia in CodSpeedHQ/runner#23 feat/add codspeed cli by...

dependabot[bot]

How to convert ROI coordinates from relative to pixels

3

* nd2 version: 5.42.06 * Python version: 3.9 * Operating System: W10 ### Description This is not really an issue, just a suggestion to add to the documentation ### What...

Kees-van-der-Oord-Nikon