Tingting Wang

> I would suggest to adapt the https://github.com/DorresteinLaboratory/XCMS3_FeatureBasedMN/blob/master/XCMS3_Preprocessing.Rmd file for your analyses. That is the most recent and complete file. The other two example Rmds seem to be outdated. Hi...

Dear Johannes, Thank you very much for your reply. I used the exactly same script and sample you uploaded in Github, and have not used my own samples. If I...

Dear Johannes, Okay, the codes I used are here library(BiocStyle) library(xcms) library(Spectra) library(pander) register(SerialParam()) library(xcms) dda_file % head() ## F1.S1570 F1.S1588 F1.S1592 F1.S1594 F1.S1595 F1.S1596 130.96578 388.25426 89.93779 83.99569 371.22409...

Hi again, Thank you for your answer, I reinstalled R and the corresponding package, and now I came to another issue. library(BiocStyle) library(xcms) library(Spectra) library(pander) library(xcms) dda_file Cc: Tingting Wang...

Hi Johannes Thank you so much, it worked! It is very nice to use for my specific metabolites annotation. I just noticed that I still need to select the most...

Dear Johannes, Thanks for your reply, I already installed docker as you said and get your docker image. Sure I would like to work with Massbank if it is possible,...

Hi again, I made it work somehow, both with Docker on R studio server and on my own data of my computer I work with HMDB in most time, and...