Tim Sainburg

Hey @marius10p and @achristensen56 did you ever put together something there? I was thinking about trying to write a spikeinterface plug in, it would be useful to have some reference...

The Parametric UMAP submodule has a non-parametric module that saves loss. See the bottom figure in this notebook. https://github.com/lmcinnes/umap/blob/master/notebooks/Parametric_UMAP/06.0-nonparametric-umap.ipynb

Is the dataset to large to input the dense data (feature_layer) rather than make it part of the dataframe? If so it seems like you would need to build the...

I'm not sure what's going on here, I haven't seen this error before. You're running the same notebook in the repo? ``` FileNotFoundError: Unsuccessful TensorSliceReader constructor: Failed to find any...

Hi Silvia, This is the code for the figure you mentioned: https://github.com/timsainb/avgn_paper/blob/V2/notebooks/05.0-viz-transitions-continuous/english-traj/english-say-day-way-4ms.ipynb https://github.com/timsainb/avgn_paper/blob/V2/notebooks/05.0-viz-transitions-continuous/english-traj/english-words-latent-trajectory.ipynb All of the figures in that paper are produced by notebooks in that repo. It's a little...

Hey Matt! Thanks for letting me know. I wrote these tools in Python 3 so __init__ files wouldn't be necessary (I think with 3.3+). But if everything works for Python...

Hi @robinmeier Sorry for the slow reply. Could you try removing the exception that prints "failed to load BF" and see where the error is occuring in the code? To...

Hi Robin, That error message is saying that the directory /BF/ does not exist, so whatever path is supposed to be pointed at the wav files is pointed somewhere else....

Yes, I'm not 100% sure what the problem here is without having access to your filesystem and the code. If the data is correctly downloaded to `'/Volumes/1TSSD/bird_datasets/3470165/Bird*/Wave/*.wav'` then it should...

Either version should work. The requirements list was auto-generated, I should probably go in there and manually change some of these.