Timo Sachsenberg
Timo Sachsenberg
> Funnily enough, the full sort is also very wasteful in the presence of "max_nr_seeds". True but 1. partial_sort is not stable 2. probably still fast enough
@alhigaylan can you try to get the IMPeakPicker code updated and pass tests?
What needs a bit more thought. If we do COW then we also need to make sure this is thread-safe. Not sure if this is a good solution … Also...
## How the Mismatch Happens in ProteomicsLFQ In a typical ProteomicsLFQ workflow, the accession mismatch occurs during the protein inference step. --- ### 1. Initial Peptide-to-Protein Mapping (PeptideIndexer) Peptide AAAK...
@jpfeuffer that was the AI explanation.
I agree and don't know why it could be no superset. So we should do something like: ``` iBAQ = Σ Intensity(unique peptides assigned to protein group leader) --------------------------------------------------------- N_theoretical(peptides...
needs a GNPS MGF file as test. otherwise looks good to me
green = deisotoped
I currently have a solution in my NuXL branch that prevents the high intensity peaks to be deisotoped