Thomas Stjernegaard Jeppesen

Results 46 issues of Thomas Stjernegaard Jeppesen

Missing match to https://www.gbif.org/species/176481923 again could be the deviating higher classification. ``` { "count": 2145, "verbatim_kingdom": "null", "verbatim_phylum": "Firmicutes", "verbatim_class": "Clostridia", "verbatim_order": "Clostridiales", "verbatim_family": "Peptococcaceae", "verbatim_genus": "Pelotomaculum", "verbatim_species": "null", "verbatim_infra":...

bug

the genus Gordonia is in GTDB https://www.gbif.org/species/176467296 but maybe the deviating spelling in the higher classification causes the missing match? ``` { "count": 2249, "verbatim_kingdom": "null", "verbatim_phylum": "Actinobacteria", "verbatim_class": "Actinobacteria",...

bug

The genus `Haliangium` doesn´t snap to [Haliangium](https://www.gbif.org/species/176483783) The phylum has been changed by GTDB, but the family now matches the verbatim. Dont know if it is too weak that family...

bug

In GTDB the name is changed: `Actinobacteria` > `Actinobacteriota` ``` { "count": 38099, "verbatim_kingdom": "null", "verbatim_phylum": "Actinobacteria", "verbatim_class": "null", "verbatim_order": "null", "verbatim_family": "null", "verbatim_genus": "null", "verbatim_species": "null", "verbatim_infra": "null", "verbatim_rank":...

bug
backbone

Another phylum that is spelled different (correct?) in GTDB: `Bacteroidetes` > `Bacteroidota` ``` { "count": 39588, "verbatim_kingdom": "null", "verbatim_phylum": "Bacteroidetes", "verbatim_class": "null", "verbatim_order": "null", "verbatim_family": "null", "verbatim_genus": "null", "verbatim_species": "null",...

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backbone

In GTDB, the pyhylum is named Actinobacteriota. Would it be possible for the parser to map `Acidobacteria` > `Actinobacteriota` ? ``` { "count": 42391, "verbatim_kingdom": "null", "verbatim_phylum": "Acidobacteria", "verbatim_class": "null",...

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backbone

Seemingly Deltaproteobacteria and Betaproteobacteria are absent from GTDB: https://www.gbif.org/species/176444017 But I wonder why it isn´t merged in from ITIS : https://www.catalogueoflife.org/?taxonKey=622CP ``` { "count": 45259, "verbatim_kingdom": "null", "verbatim_phylum": "Proteobacteria", "verbatim_class":...

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backbone

``` { "count": 1417, "verbatim_kingdom": "Animalia", "verbatim_phylum": "Chordata", "verbatim_class": "null", "verbatim_order": "null", "verbatim_family": "null", "verbatim_genus": "null", "verbatim_species": "NA", "verbatim_infra": "null", "verbatim_rank": "null", "verbatim_verbatimRank": "null", "verbatim_scientificName": "Tunicata", "verbatim_generic": "null", "verbatim_author": "null",...

bug

``` { "count": 8697, "verbatim_kingdom": "null", "verbatim_phylum": "Chloroflexi", "verbatim_class": "Ktedonobacteria", "verbatim_order": "Ktedonobacterales", "verbatim_family": "Ktedonobacteraceae", "verbatim_genus": "null", "verbatim_species": "null", "verbatim_infra": "null", "verbatim_rank": "family", "verbatim_verbatimRank": "null", "verbatim_scientificName": "Ktedonobacteraceae", "verbatim_generic": "null", "verbatim_author": "null",...

bug

This could be related to https://github.com/gbif/checklistbank/issues/116 ``` { "count": 10219, "verbatim_kingdom": "null", "verbatim_phylum": "Proteobacteria", "verbatim_class": "Alphaproteobacteria", "verbatim_order": "Rhizobiales", "verbatim_family": "null", "verbatim_genus": "Nordella", "verbatim_species": "null", "verbatim_infra": "null", "verbatim_rank": "genus", "verbatim_verbatimRank": "null",...

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