thom-ST

((base) mahe@pop-os:~/Downloads/PhD/Automation Trial/Automation scripts/AAI&ANI/sample/fasta$ ezaai extract -i Cn.fasta -o Cn.db -l "Clavibacter nebraskensis" [MAY 28 11:09:46] EzAAI |: EzAAI - v1.2.3 [Feb. 2024] [MAY 28 11:09:47] EzAAI |: Running prodigal...

@endixk (base) mahe@pop-os:~/Downloads/PhD/Automation Trial/Automation scripts/AAI&ANI/sample$ ezaai extract -i Ci.fasta -o ci.db [JUN 03 12:52:08] EzAAI |: EzAAI - v1.2.3 [Feb. 2024] [JUN 03 12:52:08] EzAAI |: Running prodigal on genome...

@endixk But in WSL , it was working in fine i cant process batch files..for calculate.. i want to understand why its not running on Popos (linux)

(base) mahe@pop-os:~/Downloads/PhD/Automation Trial/Unique & Common/Input$ makeFurDb -t targets -n neighbors -d fur.db using Genome_A.fa as target representative making Blast database makeFurDb - exit status 3

[targets.zip](https://github.com/user-attachments/files/17288533/targets.zip) [neighbors.zip](https://github.com/user-attachments/files/17288534/neighbors.zip) [fur.db.zip](https://github.com/user-attachments/files/17288133/fur.db.zip) PFA

(eggnog) mahe@pop-os:~$ wget http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog.db.gz wget http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog.taxa.tar.gz wget http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog_proteins.dmnd.gz --2025-12-08 13:14:05-- http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog.db.gz Resolving eggnog5.embl.de (eggnog5.embl.de)... 194.94.44.170 Connecting to eggnog5.embl.de (eggnog5.embl.de)|194.94.44.170|:80... connected. HTTP request sent, awaiting response... 200 OK Length: 6776977123 (6.3G)...

(eggnog) mahe@pop-os:~$ download_eggnog_data.py -y --data_dir ~/eggnog_data -D -F -M Downloading "eggnog.db" at /home/mahe/eggnog_data... cd /home/mahe/eggnog_data && wget -nH --user-agent=Mozilla/5.0 --relative --no-parent --reject "index.html*" --cut-dirs=4 -e robots=off -O eggnog.db.gz http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog.db.gz &&...

I tried eggnog5...also and eggnog6 also...but some databases it's not downloading beyond 1.01 gb in manually also intried same நன்றி மற்றும் வணக்கங்கள் இன்பன்ட் தாமஸ்.சூ On Tue, 9 Dec, 2025, 7:44 ...