gggenomes
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thackl
A grammar of graphics for comparative genomics
Support read mapping visualization. Simple viz should be straight-forward ala `geom_feat(position="pile")` with some sensible defaults for large numbers of features. For reading .bam could borrow from bioconductor. Might make sense...
`pick()` is for genomes what `dplyr::select()` is for columns. `put()` (or a similar name) could become an analog to `dplyr::relocate()` for bins and seqs.
Hello Dr. Thackle, Is there any way that I can make the y-axis appear for my GC feat using geom_wiggle()? Also, I have a geom_feat() that I want to offset...
I'm trying to fix all the Errors, Warnings and Notes of `R CMD check`. I already fixed a couple. Still getting errors in the examples. Status is: ``` Status: 1...
Dear Developer, I want to add breaks in my genomes, like described in issue #119 I could reproduce the example from #119 successfully but it did not work with my...
While documenting the parameters, I think I found a bug. But before I fix it, I wanted to be sure that it is actually a bug and not an obscure...
I have attempted to create a seq track using the function read_seqs() with either my .fna or .gff3 file as argument. But in any case get an empty tibble as...
# add a function to manually generate the GC content data.frame, which can easily add into the plot. require(Biostrings) gc_content
