Tom Gillespie

Results 297 comments of Tom Gillespie
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I've encountered this issue and finally figured out that it is because you have to pass `-include /path/to/chibicc/include/stdarg.h` as an argument to chibicc. `stdarg.h` is a header-only implementation of va_list...

This should not be a special case. When exporting to latex org converts any unknown block type e.g. `#+begin_asdf` as `\begin{asdf}` environment, and when exporting to html it exports as...

I don't think markdown code blocks would work because those need to translate as `#+begin_src asdf` (iirc). Maybe you could use a fenced code block with a type annotation for...

If you are using the /annotations endpoint there is the longestOnly option that controls this.

I think that SciGraph services are not affected because they use log4j 1.2. OWLAPI may be affected and thus the graphloading routines could be affected, but that code is not...

If you are looking for a endpoint to play with the NIF Ontology endpoint swagger docs are here https://scicrunch.org/browse/api-docs/index.html?url=https://scicrunch.org/swagger-docs/swagger.json, full access is documented at https://github.com/SciCrunch/NIF-Ontology#using-nifstd.

This will be a very useful addition. I have encountered a number of issues querying relationships that are related to this. That said there are cases where we change our...

@cmungall we are considering a couple potential fixes. One is to simply drop duplicate matches by adding code to filter [here](https://github.com/SciGraph/SciGraph/blob/master/SciGraph-services/src/main/java/io/scigraph/services/resources/VocabularyService.java#L223). Our clients wouldn't be affected by this change, but...

Another example is http://matrix.neuinfo.org:9000/scigraph/vocabulary/autocomplete/ventral%20post

A related issue (prompting the title change), which is not so much a scigraph problem as a client problem, is that scigraph will shorten iris to curies that have slashes...