Teemu Kataja

Results 14 comments of Teemu Kataja

> Hi @teemukataja, good work but I spotted several things to fix: > > * the title still says v1.0.0 Title now says v1.1.0 > * In "Beacon object", the...

Here is our interpretation of what these counts mean. | Context (model) | Key (field) | Description in specification | What we think it means | | ------------- | -------------...

> Currently, if a dataset if returning an error it is only included in the ALL option. In what case would a **dataset** return an error? Currently in Beacon we...

I can see your point, but if the user is looking for `start: 1111` on coordinate system of `GRCh38` then simply changing assembly to `GRCh37` won't give the user correct...

I have gone over [The Beacon Network Design Document](https://docs.google.com/document/d/1szKmxH0Ti8dcQ-CxKh9Iw5V3H6HuMYw4uYWb4Bynm9k/edit?usp=sharing) and drafted an OAS3 specification with a few proposals, such as using the _new_ info key and changing PUT to PATCH....

I have changed PATCH back to PUT and added the new Registry-specific endpoints. [Link to YAML](https://gist.githubusercontent.com/teemukataja/b583bd9c6c57afa9a04024f070c79a5b/raw/71030b58cda453e80cb3a06d34ea01987c99b468/beacon-network-specification-0_1.yml) [Link to Swagger Editor](https://editor.swagger.io/?url=https://gist.githubusercontent.com/teemukataja/b583bd9c6c57afa9a04024f070c79a5b/raw/71030b58cda453e80cb3a06d34ea01987c99b468/beacon-network-specification-0_1.yml) I believe I found some discrepancies between `GET /topology` and...

**Progenetix Beacon+** was added to the aggregator that https://beacon-ui-beacon.rahtiapp.fi/#!/view queries

> Great! Example: > > * https://beacon.progenetix.org/beaconplus-server/beaconresponse.cgi?datasetIds=&referenceName=17&assemblyId=GRCh38&start=7577121&referenceBases=G&alternateBases=A > > ... works, but some errors in the response, info have to be ironed out. Here is how it looks at our...

Because the table displays **response** data, not **request** data. The table was devised from a need for wildcard differentiation, for example: ![image](https://user-images.githubusercontent.com/17040963/49797831-52e55000-fd49-11e8-9f35-20b962f54418.png) However, we will take your feedback into account,...