Tom Brown

Hi Tomas, Thank you for following up. Hopefully Alex will get back to you. I ran braker in two modes and neither of the outputs were ideal. I ran once...

[braker.upload.log](https://github.com/Gaius-Augustus/BRAKER/files/7344396/braker.upload.log) [GeneMark-ET.upload.stdout.txt](https://github.com/Gaius-Augustus/BRAKER/files/7344397/GeneMark-ET.upload.stdout.txt) Hi Tomas, This is a run that crashed due to a timeout error, so the braker log is incomplete. The GeneMark-ET step finished though, so this should be...

Hi Tomas, Thank you for the fix! It looks like the genome size is correct now, but the A/C/G/T/Other content doesn't looks correct. Do you know if this is important?...

Hi Tomas, The run finished and the results were not ideal. Below are the busco scores based on the augustus.hints.codingseq file: C:0.2%[S:0.2%,D:0.0%],F:0.9%,M:98.9% I have attached the braker log from the...